IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene ODF2 Ensembl ENSG00000136811 Chromosome 9 Start 130258157 End 130303059
Description Outer dense fiber protein 2 (Outer dense fiber of sperm tails protein 2)(Cenexin) [Source:UniProtKB/Swiss-Prot;Acc:Q5BJF6]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 8114
     Entrez Gene : 4957
     UCSC : uc004bvb.2
     GeneCards : 8114
     RefSeq : NM_002540
     CCDS : CCDS6902.1
     Uniprot : Q96FN2
     Interpro : Q96FN2
     OMIM : 602015
     GeneTests : ODF2
     CGAP : ODF2
     PMID : 9045620

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  41068_at  0.30  4.53e-2  8.50e-2  0.34  1.39e-1  2.16e-1
 HG_U133A  210415_s_at  0.91  1.21e-8  3.79e-8  1.14  1.10e-10  1.40e-10
 HG_U133_Plus2  210415_s_at  -0.32  5.95e-2  9.79e-2  -0.27  2.01e-1  2.52e-1
 HG_U133_Plus2  225617_at  0.35  2.31e-4  6.84e-4  0.82  8.48e-13  5.20e-12
 Stanford  3263  1.06  6.00e-4  1.04e-2  0.78  2.87e-3  2.88e-2
 Stanford  18478  0.53  2.22e-2  1.08e-1  0.20  6.71e-1  8.32e-1
 Agilent_HS_21.6K  1952  -0.01  7.96e-1  8.84e-1  0.09  6.74e-2  1.54e-1
 Agilent_HS_21.6K  10401  0.08  2.61e-2  9.19e-2  0.10  6.32e-3  2.48e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  210415_s_at  0.12  7.70e-1  9.77e-1  0.27  4.51e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 41068_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 210415_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 210415_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 225617_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 3263    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 18478    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 1952    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 10401    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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Cancer Gene Index        (help)

If 0 entry was found, please remove the search key "lung cancer".
Keyword DiseaseData Statement PubMed Organism
odf2 prostate cancer In four patients, SEREX immunoscreening of a prostate cancer cDNA expression library identified several antigens recognized by treatment-associated autoantibodies, including PARP1, ZNF707 + PTMA, CEP78, SDCCAG1, and ODF2. 17332294 Human

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