IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene POMT1 Ensembl ENSG00000130714 Chromosome 9 Start 133368110 End 133389014
Description Protein O-mannosyl-transferase 1 (EC 2.4.1.109)(Dolichyl-phosphate-mannose--protein mannosyltransferase 1) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y6A1]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 9202
     Entrez Gene : 10585
     UCSC : uc004cau.2
     GeneCards : 9202
     RefSeq : NM_001077365
     CCDS : CCDS6943.1
     Uniprot : Q9NX82
     Interpro : Q9NX82
     OMIM : 607423
     GeneTests : POMT1
     CGAP : POMT1
     PMID : 10366449

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  218476_at  0.14  1.05e-1  1.37e-1  1.79  1.20e-43  2.46e-43
 HG_U133_Plus2  218476_at  -0.23  2.99e-3  6.98e-3  -0.47  4.80e-7  1.47e-6
 Stanford  15954  0.62  2.69e-3  2.75e-2  0.39  1.39e-1  3.39e-1
 Stanford  17454  0.62  2.69e-3  2.75e-2  0.39  1.39e-1  3.39e-1
 Agilent_HS_21.6K  15222  -0.07  4.09e-3  2.32e-2  -0.07  3.99e-3  1.70e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  218476_at  -0.41  1.80e-1  8.21e-1  -0.27  3.11e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 218476_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 218476_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 15954    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 17454    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 15222    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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