IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SARDH Ensembl ENSG00000123453 Chromosome 9 Start 135518507 End 135594863
Description Sarcosine dehydrogenase, mitochondrial Precursor (SarDH)(EC 1.5.99.1)(BPR-2) [Source:UniProtKB/Swiss-Prot;Acc:Q9UL12]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 10536
     Entrez Gene : 1757
     UCSC : uc004cep.3
     GeneCards : 10536
     RefSeq : NM_001134707
     CCDS : CCDS6978.1
     Uniprot : Q9UL12
     Interpro : Q9UL12
     OMIM : 604455
     GeneTests : SARDH
     CGAP : SARDH
     PMID : 10444331

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  31595_at  0.26  2.56e-2  5.23e-2  0.03  8.73e-1  9.10e-1
 HG_U133A  207889_at  0.20  1.07e-1  1.39e-1  3.69  1.10e-73  3.87e-73
 HG_U133A  210063_at  -0.48  6.63e-5  1.41e-4  3.33  5.01e-80  2.03e-79
 HG_U133A  210862_s_at  0.14  1.12e-1  1.45e-1  0.89  7.58e-8  9.15e-8
 HG_U133A  211322_s_at  -0.50  3.99e-5  8.72e-5  4.63  9.35e-109  8.08e-108
 HG_U133_Plus2  207889_at  0.48  8.60e-3  1.79e-2  0.45  3.37e-2  4.99e-2
 HG_U133_Plus2  210063_at  -0.12  4.32e-1  5.22e-1  -0.68  9.92e-5  2.22e-4
 HG_U133_Plus2  210862_s_at  0.39  1.96e-2  3.71e-2  0.82  1.73e-5  4.30e-5
 HG_U133_Plus2  211322_s_at  0.32  1.98e-2  3.74e-2  0.35  1.62e-2  2.54e-2
 HG_U133_Plus2  234536_at  -0.15  3.81e-1  4.72e-1  -0.13  4.33e-1  4.95e-1
 HG_U133_Plus2  234586_at  0.06  7.11e-1  7.75e-1  -0.29  1.01e-1  1.35e-1
 Agilent_HS_21.6K  5648  -0.09  5.76e-2  1.61e-1  -0.08  1.44e-1  2.71e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  207889_at  -0.36  4.68e-1  9.21e-1  0.26  3.53e-1  1.00e+0
 HG_U133A  210063_at  0.02  9.63e-1  9.98e-1  0.24  3.09e-1  1.00e+0
 HG_U133A  210862_s_at  -0.25  4.51e-1  9.15e-1  -0.22  3.47e-1  1.00e+0
 HG_U133A  211322_s_at  -0.64  1.40e-1  8.02e-1  -0.55  7.07e-2  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 31595_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 207889_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 210063_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 210862_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 211322_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 207889_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 210063_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 210862_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 211322_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 234536_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 234586_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 5648    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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