IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene C9orf116 Ensembl ENSG00000160345 Chromosome 9 Start 137526848 End 137533401
Description UPF0691 protein C9orf116 (Pierce 1) [Source:UniProtKB/Swiss-Prot;Acc:Q5BN46]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 28435
     Entrez Gene : 138162
     UCSC : uc004cft.1
     GeneCards : 28435
     RefSeq : NM_001048265
     CCDS : CCDS6989.1
     Uniprot : Q5BN46
     Interpro : Q5BN46
     GeneTests : C9orf116
     CGAP : C9orf116
     PMID : 12477932

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  221946_at  -0.09  4.30e-1  4.86e-1  -1.02  9.80e-11  1.24e-10
 HG_U133A  59437_at  -0.17  2.30e-2  3.39e-2  0.24  7.00e-2  7.41e-2
 HG_U133_Plus2  221946_at  -0.93  9.40e-5  3.00e-4  -2.24  4.58e-15  3.62e-14
 HG_U133_Plus2  59437_at  -0.25  1.42e-1  2.06e-1  -0.93  1.20e-5  3.04e-5
 Agilent_HS_21.6K  10522  -0.10  4.85e-2  1.42e-1  -0.09  8.35e-2  1.81e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  221946_at  -0.02  9.10e-1  9.95e-1  0.23  8.77e-2  1.00e+0
 HG_U133A  59437_at  0.07  7.98e-1  9.82e-1  0.29  6.38e-2  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 221946_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 59437_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 221946_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 59437_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 10522    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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