IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene OBP2A Ensembl ENSG00000122136 Chromosome 9 Start 137577806 End 137581636
Description Odorant-binding protein 2a Precursor (OBPIIa) [Source:UniProtKB/Swiss-Prot;Acc:Q9NY56]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :
     HGNC : 23380
     Entrez Gene : 29991
     UCSC : uc004cgb.2
     GeneCards : 23380
     RefSeq : NM_014582
     CCDS : CCDS6992.1
     Uniprot : Q9NY56
     Interpro : Q9NY56
     OMIM : 164320
     GeneTests : OBP2A
     CGAP : OBP2A

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  220848_x_at  0.13  2.53e-1  3.03e-1  1.00  1.40e-20  2.05e-20
 HG_U133A  220959_s_at  0.43  6.68e-3  1.07e-2  5.27  5.45e-112  5.18e-111
 HG_U133_Plus2  220848_x_at  0.55  8.60e-3  1.79e-2  0.10  4.87e-1  5.48e-1
 HG_U133_Plus2  220959_s_at  0.46  4.45e-2  7.62e-2  0.00  9.95e-1  9.96e-1
 HG_U133_Plus2  233860_s_at  0.09  5.89e-1  6.69e-1  -0.26  1.45e-2  2.30e-2
 HG_U133_Plus2  234436_x_at  0.13  4.42e-1  5.32e-1  0.05  6.81e-1  7.27e-1
 HG_U133_Plus2  234841_x_at  0.44  5.73e-3  1.25e-2  0.33  3.78e-3  6.64e-3
 Agilent_HS_21.6K  21375  0.32  6.20e-3  3.20e-2  0.30  6.03e-3  2.38e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  220848_x_at  -0.57  2.73e-2  6.98e-1  0.20  2.45e-1  1.00e+0
 HG_U133A  220959_s_at  -0.25  5.30e-1  9.35e-1  -0.16  5.78e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 220848_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 220959_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 220848_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 220959_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 233860_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 234436_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 234841_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 21375    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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