IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SNAPC4 Ensembl ENSG00000165684 Chromosome 9 Start 138389851 End 138413072
Description snRNA-activating protein complex subunit 4 (SNAPc subunit 4)(snRNA-activating protein complex 190 kDa subunit)(SNAPc 190 kDa subunit)(Proximal sequence element-binding transcription factor subunit alpha)(PSE-binding factor subunit alpha)(PTF subunit alpha) [Source:UniProtKB/Swiss-Prot;Acc:Q5SXM2]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 11137
     Entrez Gene : 6621
     UCSC : uc004chh.2
     GeneCards : 11137
     RefSeq : NM_003086
     CCDS : CCDS6998.1
     Uniprot : Q5SXM2
     Interpro : Q5SXM2
     OMIM : 602777
     GeneTests : SNAPC4
     CGAP : SNAPC4
     PMID : 9418884

< Top >


Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  35092_at  0.11  4.67e-1  5.72e-1  0.27  1.45e-1  2.23e-1
 HG_U133A  205658_s_at  0.08  1.42e-1  1.80e-1  -3.36  2.09e-64  6.09e-64
 HG_U133A  215926_x_at  -0.21  4.44e-2  6.23e-2  0.09  4.00e-1  4.10e-1
 HG_U133_Plus2  205658_s_at  0.29  1.15e-2  2.31e-2  0.50  8.67e-5  1.95e-4
 HG_U133_Plus2  215926_x_at  -0.27  3.19e-2  5.68e-2  -0.37  5.38e-3  9.19e-3
 Agilent_HS_21.6K  14198  0.04  3.46e-1  5.33e-1  0.04  3.21e-1  4.80e-1

< Top >


Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  205658_s_at  -0.21  3.16e-1  8.80e-1  -0.15  4.26e-1  1.00e+0
 HG_U133A  215926_x_at  -0.15  5.32e-1  9.35e-1  0.39  6.82e-2  1.00e+0

< Top >


Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 35092_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 205658_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 215926_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 205658_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 215926_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 14198    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

< Top >


Download all image files.
Save all PNG files.    Save all PDF files.    Save all PS files.