IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SEC16A Ensembl ENSG00000148396 Chromosome 9 Start 138454370 End 138491962
Description Protein transport protein Sec16A (Protein SEC16 homolog A) [Source:UniProtKB/Swiss-Prot;Acc:O15027]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 29006
     Entrez Gene : 9919
     UCSC : uc004chx.2
     GeneCards : 29006
     RefSeq : NM_014866
     Uniprot : O15027
     Interpro : O15027
     OMIM : 612854
     GeneTests : SEC16A
     CGAP : SEC16A
     PMID : 9205841

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  35313_at  -0.08  5.19e-1  6.22e-1  -0.32  4.83e-2  8.91e-2
 HG_U133A  215696_s_at  0.03  6.01e-1  6.48e-1  -3.39  8.96e-81  3.71e-80
 HG_U133_Plus2  215696_s_at  0.19  3.04e-2  5.44e-2  0.33  3.56e-5  8.47e-5

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  215696_s_at  0.19  4.08e-1  9.03e-1  -0.01  9.50e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 35313_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 215696_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 215696_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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