IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene C9orf86 Ensembl ENSG00000196642 Chromosome 9 Start 138822195 End 138855460
Description Putative GTP-binding protein Parf (Partner of ARF) [Source:UniProtKB/Swiss-Prot;Acc:Q3YEC7]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 24703
     Entrez Gene : 55684
     UCSC : uc004cji.1
     GeneCards : 24703
     RefSeq : NM_001173988
     CCDS : CCDS48058.1
     Uniprot : Q9H935
     Interpro : Q9H935
     OMIM : 610615
     GeneTests : C9orf86
     CGAP : C9orf86
     PMID : 14702039

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  219828_at  0.25  1.03e-3  1.88e-3  1.11  2.06e-20  3.01e-20
 HG_U133_Plus2  219828_at  0.93  3.32e-14  4.10e-13  1.24  3.26e-17  3.31e-16
 HG_U133_Plus2  223166_x_at  0.12  1.64e-1  2.34e-1  0.31  8.64e-4  1.68e-3
 HG_U133_Plus2  225377_at  0.65  2.69e-7  1.33e-6  1.07  1.02e-10  4.88e-10
 Agilent_HS_21.6K  6132  -0.04  2.89e-1  4.76e-1  -0.01  8.56e-1  9.12e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  219828_at  0.04  9.02e-1  9.94e-1  0.15  4.39e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 219828_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 219828_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 223166_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 225377_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 6132    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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