IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SNAPC3 Ensembl ENSG00000164975 Chromosome 9 Start 15412732 End 15455830
Description snRNA-activating protein complex subunit 3 (SNAPc subunit 3)(Small nuclear RNA-activating complex polypeptide 3)(snRNA-activating protein complex 50 kDa subunit)(SNAPc 50 kDa subunit)(Proximal sequence element-binding transcription factor subunit beta)(PSE-binding factor subunit beta)(PTF subunit beta) [Source:UniProtKB/Swiss-Prot;Acc:Q92966]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 11136
     Entrez Gene : 6619
     UCSC : uc003zlt.2
     GeneCards : 11136
     RefSeq : NM_001039697
     CCDS : CCDS6478.1
     Uniprot : Q92966
     Interpro : Q92966
     OMIM : 602348
     GeneTests : SNAPC3
     CGAP : SNAPC3
     PMID : 9003788

< Top >


Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  38224_at  0.13  3.02e-1  4.07e-1  0.30  1.37e-1  2.13e-1
 HG_U133A  204001_at  -0.05  3.50e-1  4.04e-1  -1.10  1.00e-32  1.74e-32
 HG_U133A  210465_s_at  0.48  1.88e-10  7.01e-10  0.66  2.94e-7  3.51e-7
 HG_U133A  222286_at  -0.08  3.01e-1  3.54e-1  2.29  3.84e-88  1.90e-87
 HG_U133_Plus2  204001_at  0.03  7.54e-1  8.10e-1  0.16  1.66e-1  2.13e-1
 HG_U133_Plus2  210465_s_at  0.26  3.71e-2  6.49e-2  0.04  7.66e-1  8.03e-1
 HG_U133_Plus2  222286_at  -0.24  7.90e-3  1.66e-2  -0.65  5.98e-7  1.81e-6
 HG_U133_Plus2  229712_at  -0.40  3.23e-2  5.75e-2  -1.03  4.23e-6  1.14e-5
 Stanford  2269  0.86  9.13e-3  6.09e-2  0.55  3.76e-2  1.40e-1
 Agilent_HS_21.6K  11817  -0.07  8.96e-2  2.18e-1  -0.04  2.64e-1  4.19e-1

< Top >


Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204001_at  0.06  7.65e-1  9.75e-1  0.13  3.58e-1  1.00e+0
 HG_U133A  210465_s_at  0.70  1.94e-2  6.83e-1  0.14  4.02e-1  1.00e+0
 HG_U133A  222286_at  -0.06  8.76e-1  9.91e-1  -0.07  7.66e-1  1.00e+0

< Top >


Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 38224_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204001_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 210465_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 222286_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204001_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 210465_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 222286_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 229712_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 2269    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 11817    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

< Top >


Download all image files.
Save all PNG files.    Save all PDF files.    Save all PS files.