IGDB.NSCLC Gene View
Gene Information Microarray Gene Expression Result Microarray Sample Data
 
Gene Information        (help)
Gene C9orf72 Ensembl ENSG00000147894 Chromosome 9 Start 27536544 End 27563842
Description Uncharacterized protein C9orf72 [Source:UniProtKB/Swiss-Prot;Acc:Q96LT7]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 28337
     Entrez Gene : 203228
     UCSC : uc003zqq.2
     GeneCards : 28337
     RefSeq : NM_018325
     CCDS : CCDS6522.1
     Uniprot : Q96LT7
     Interpro : Q96LT7
     GeneTests : C9orf72
     CGAP : C9orf72
     PMID : 12477932

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133_Plus2  1553133_at  -1.58  1.62e-20  4.01e-19  -1.60  2.31e-13  1.50e-12
 HG_U133_Plus2  1553134_s_at  -1.16  1.14e-8  6.92e-8  -1.21  3.45e-7  1.08e-6
 HG_U133_Plus2  225919_s_at  -0.63  9.67e-16  1.42e-14  -0.53  3.14e-6  8.63e-6
 Agilent_HS_21.6K  6780  -0.09  6.46e-2  1.74e-1  -0.07  3.52e-1  5.12e-1
 Agilent_HS_21.6K  14788  -0.02  4.62e-1  6.42e-1  -0.02  3.58e-1  5.18e-1

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133_Plus2 - 1553133_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1553134_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 225919_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 6780    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 14788    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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