IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene TAF1L Ensembl ENSG00000122728 Chromosome 9 Start 32620097 End 32625577
Description Transcription initiation factor TFIID 210 kDa subunit (TBP-associated factor 210 kDa)(TAF(II)210)(TBP-associated factor 1-like) [Source:UniProtKB/Swiss-Prot;Acc:Q8IZX4]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 18056
     Entrez Gene : 138474
     UCSC : uc003zrg.1
     GeneCards : 18056
     RefSeq : NM_153809
     Uniprot : Q8IZX4
     Interpro : Q8IZX4
     OMIM : 607798
     GeneTests : TAF1L
     CGAP : TAF1L
     PMID : 12217962

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Somatic Mutaions        (help)
Lung cancer Adenocarcinoma Squamous Cell Carcinoma
Unique Mutated Samples % Mutated Total Unique
Samples
Unique Mutated
Samples
% Mutated Total Unique
Samples
Unique Mutated
Samples
% Mutated Total Unique
Samples
7 8.05 87 3 8.57 35 0 0.00 18
Sample datas
Sample Name Histology Subtype DNA Mutation Protein Mutation Mutation Description Zygosity Genomic Co-ordinates NCBI36 Pubmed
PD1351a AD c.5472C>A p.H1824Q Substitution - Missense Heterozygous 9:32620106-32620106 
PD1351a AD c.5472C>A p.H1824Q Substitution - Missense Heterozygous 9:32620106-3262010616140923
PD1352a AD c.2250G>T p.L750F Substitution - Missense Unknown 9:32623328-3262332816140923
PD1414a AD c.129C>T p.G43G Substitution - coding silent Unknown 9:32625449-3262544916140923

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133_Plus2  1553011_at  -0.20  2.14e-1  2.92e-1  -0.12  5.47e-1  6.04e-1

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133_Plus2 - 1553011_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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