IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene APTX Ensembl ENSG00000137074 Chromosome 9 Start 32962609 End 32991626
Description Aprataxin (EC 3.-.-.-)(Forkhead-associated domain histidine triad-like protein)(FHA-HIT) [Source:UniProtKB/Swiss-Prot;Acc:Q7Z2E3]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 15984
     Entrez Gene : 54840
     UCSC : uc003zrs.2
     GeneCards : 15984
     RefSeq : NM_017692
     CCDS : CCDS6531.1
     Uniprot : Q7Z6V7
     Interpro : Q7Z6V7
     OMIM : 606350
     GeneTests : APTX
     CGAP : APTX
     PMID : 11586299

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  218527_at  -0.09  6.11e-2  8.35e-2  0.24  1.20e-5  1.39e-5
 HG_U133_Plus2  218527_at  0.28  9.93e-6  3.79e-5  0.66  1.22e-11  6.53e-11
 HG_U133_Plus2  222658_s_at  0.34  1.08e-5  4.09e-5  0.67  1.79e-10  8.35e-10
 HG_U133_Plus2  243132_at  -0.05  7.91e-1  8.41e-1  -0.64  2.20e-3  4.01e-3
 Agilent_HS_21.6K  13394  0.25  6.32e-4  5.26e-3  0.30  2.39e-4  1.66e-3

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  218527_at  -0.06  7.73e-1  9.77e-1  0.07  6.69e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 218527_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 218527_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 222658_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 243132_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 13394    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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