IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SMU1 Ensembl ENSG00000122692 Chromosome 9 Start 33031850 End 33075989
Description WD40 repeat-containing protein SMU1 (Smu-1 suppressor of mec-8 and unc-52 protein homolog) [Source:UniProtKB/Swiss-Prot;Acc:Q2TAY7]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 18247
     Entrez Gene : 55234
     UCSC : uc003zsf.1
     GeneCards : 18247
     RefSeq : NM_018225
     CCDS : CCDS6534.1
     Uniprot : Q2TAY7
     Interpro : Q2TAY7
     GeneTests : SMU1
     CGAP : SMU1
     PMID : 11438655

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  218393_s_at  0.30  2.76e-4  5.41e-4  3.05  1.03e-68  3.28e-68
 HG_U133_Plus2  218393_s_at  0.06  5.28e-1  6.13e-1  -0.11  4.54e-1  5.15e-1
 HG_U133_Plus2  222618_at  -0.51  5.34e-10  3.88e-9  -0.48  2.11e-5  5.17e-5
 HG_U133_Plus2  228180_at  -0.66  9.57e-8  5.09e-7  -0.70  4.02e-11  2.02e-10
 HG_U133_Plus2  233946_at  -0.44  2.17e-5  7.81e-5  -0.29  3.45e-3  6.10e-3
 Agilent_HS_21.6K  13945  -0.05  5.27e-1  6.96e-1  -0.02  7.93e-1  8.71e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  218393_s_at  0.50  1.03e-1  7.77e-1  -0.30  1.81e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 218393_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 218393_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 222618_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 228180_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 233946_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 13945    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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