IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene B4GALT1 Ensembl ENSG00000086062 Chromosome 9 Start 33100642 End 33157236
Description Beta-1,4-galactosyltransferase 1 (Beta-1,4-GalTase 1)(Beta4Gal-T1)(b4Gal-T1)(EC 2.4.1.-)(UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 1)(UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 1) [Includes Lactose synthase A protein(EC 2.4.1.22);N-acetyllactosamine synthase(EC 2.4.1.90)(Nal synthetase);Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase(EC 2.4.1.38);Beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase(EC 2.4.1.-)][Contains Processed beta-1,4-galactosyltransferase 1] [Source:UniProtKB/Swiss-Prot;Acc:P15291]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 924
     Entrez Gene : 2683
     UCSC : uc003zsg.2
     GeneCards : 924
     RefSeq : NM_001497
     CCDS : CCDS6535.1
     Uniprot : P15291
     Interpro : P15291
     OMIM : 137060
     GeneTests : B4GALT1
     CGAP : B4GALT1
     PMID : 9597550

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  32772_s_at  -0.15  4.97e-1  6.01e-1  -0.29  3.02e-1  4.04e-1
 HG_U95  40960_at  0.09  3.43e-1  4.50e-1  -0.13  2.92e-1  3.94e-1
 HG_U133A  201882_x_at  0.71  2.37e-8  7.20e-8  5.39  3.95e-101  2.77e-100
 HG_U133A  201883_s_at  0.62  2.23e-8  6.80e-8  0.78  1.13e-12  1.48e-12
 HG_U133A  211631_x_at  0.15  2.29e-2  3.38e-2  0.30  1.82e-4  2.06e-4
 HG_U133A  216627_s_at  1.04  4.65e-11  1.82e-10  1.02  4.28e-10  5.37e-10
 HG_U133_Plus2  201882_x_at  0.32  4.93e-2  8.32e-2  0.71  1.87e-4  4.02e-4
 HG_U133_Plus2  201883_s_at  1.07  3.90e-15  5.38e-14  1.27  3.51e-15  2.81e-14
 HG_U133_Plus2  211631_x_at  1.11  7.41e-14  8.77e-13  1.28  1.01e-10  4.85e-10
 HG_U133_Plus2  216627_s_at  1.17  8.31e-9  5.14e-8  0.84  8.16e-4  1.59e-3
 HG_U133_Plus2  229403_at  -0.21  2.82e-1  3.68e-1  0.26  2.39e-1  2.94e-1
 HG_U133_Plus2  238987_at  -0.61  5.48e-4  1.50e-3  -1.12  8.45e-16  7.26e-15
 Stanford  161  0.19  6.40e-1  7.85e-1  -0.22  4.52e-1  6.77e-1
 Stanford  22091  -0.22  6.13e-1  7.66e-1  -0.25  5.19e-1  7.30e-1
 Agilent_HS_21.6K  727  0.11  7.40e-2  1.91e-1  0.09  8.96e-2  1.91e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201882_x_at  -0.14  7.68e-1  9.76e-1  0.15  5.91e-1  1.00e+0
 HG_U133A  201883_s_at  -0.73  2.11e-2  6.83e-1  -0.00  9.92e-1  1.00e+0
 HG_U133A  211631_x_at  -0.43  1.38e-1  8.02e-1  0.05  7.61e-1  1.00e+0
 HG_U133A  216627_s_at  0.03  9.63e-1  9.98e-1  -0.08  8.17e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 32772_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 40960_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201882_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201883_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 211631_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 216627_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201882_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201883_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 211631_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 216627_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 229403_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 238987_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 161    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 22091    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 727    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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