IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SPINK4 Ensembl ENSG00000122711 Chromosome 9 Start 33208363 End 33238564
Description Serine protease inhibitor Kazal-type 4 Precursor (Peptide PEC-60 homolog) [Source:UniProtKB/Swiss-Prot;Acc:O60575]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 16646
     Entrez Gene : 27290
     UCSC : uc003zsh.2
     GeneCards : 16646
     RefSeq : NM_014471
     CCDS : CCDS6536.1
     Uniprot : O60575
     Interpro : O60575
     GeneTests : SPINK4
     CGAP : SPINK4
     PMID : 1400298

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  33006_at  0.69  2.67e-3  7.46e-3  0.45  7.64e-2  1.31e-1
 HG_U133A  207214_at  0.86  1.00e-9  3.48e-9  1.53  5.03e-37  9.34e-37
 HG_U133_Plus2  207214_at  0.98  7.70e-5  2.50e-4  0.86  8.01e-5  1.81e-4
 Stanford  2191  0.45  4.17e-1  6.11e-1  0.81  1.09e-1  2.89e-1
 Stanford  22619  -0.22  4.95e-1  6.78e-1  -0.04  8.90e-1  9.52e-1
 Agilent_HS_21.6K  18552  -0.02  3.47e-1  5.34e-1  -0.03  2.87e-1  4.44e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  207214_at  -0.14  5.63e-1  9.43e-1  -0.10  5.94e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 33006_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 207214_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 207214_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 2191    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 22619    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 18552    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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