IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SIGMAR1 Ensembl ENSG00000147955 Chromosome 9 Start 34624719 End 34627768
Description Sigma 1-type opioid receptor (Sigma1-receptor)(Sigma1R)(SIG-1R)(hSigmaR1)(SR31747-binding protein)(SR-BP)(Aging-associated gene 8 protein) [Source:UniProtKB/Swiss-Prot;Acc:Q99720]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 8157
     Entrez Gene : 10280
     UCSC : uc003zvb.2
     GeneCards : 8157
     RefSeq : NM_005866
     CCDS : CCDS6562.1
     Uniprot : Q8N7H3
     Interpro : Q8N7H3
     OMIM : 601978
     GeneTests : SIGMAR1
     CGAP : SIGMAR1
     PMID : 8954936

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  33879_at  0.58  5.44e-12  1.03e-10  0.96  4.51e-12  7.97e-11
 HG_U133A  201692_at  0.54  1.65e-13  7.92e-13  0.61  2.80e-15  3.79e-15
 HG_U133A  214484_s_at  1.22  1.79e-25  2.05e-24  2.17  5.28e-53  1.26e-52
 HG_U133_Plus2  201692_at  0.70  6.03e-15  8.12e-14  1.03  4.91e-20  6.82e-19
 HG_U133_Plus2  214484_s_at  0.74  3.04e-10  2.28e-9  1.19  6.74e-18  7.37e-17

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201692_at  0.00  9.89e-1  9.99e-1  0.05  8.10e-1  1.00e+0
 HG_U133A  214484_s_at  -0.01  9.86e-1  9.99e-1  -0.23  4.64e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 33879_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201692_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 214484_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201692_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 214484_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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