IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene TPM2 Ensembl ENSG00000198467 Chromosome 9 Start 35671990 End 35680053
Description Tropomyosin beta chain (Tropomyosin-2)(Beta-tropomyosin) [Source:UniProtKB/Swiss-Prot;Acc:P07951]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 12011
     Entrez Gene : 7169
     UCSC : uc003zxq.2
     GeneCards : 12011
     RefSeq : NM_003289
     CCDS : CCDS6586.1
     Uniprot : P07951
     Interpro : P07951
     OMIM : 190990
     GeneTests : TPM2
     CGAP : TPM2
     PMID : 7606936

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  32312_at  0.90  7.23e-5  3.06e-4  1.12  4.27e-4  1.46e-3
 HG_U95  32313_at  -0.27  3.27e-2  6.45e-2  -0.34  1.28e-2  2.86e-2
 HG_U95  32314_g_at  -0.62  2.54e-4  9.35e-4  -0.51  3.55e-3  9.35e-3
 HG_U133A  204083_s_at  -0.40  1.87e-4  3.75e-4  -2.79  2.92e-63  8.34e-63
 HG_U133A  212654_at  0.03  8.64e-1  8.85e-1  4.10  2.71e-83  1.19e-82
 HG_U133_Plus2  204083_s_at  -0.59  6.07e-6  2.41e-5  -1.09  1.34e-9  5.66e-9
 HG_U133_Plus2  212654_at  0.55  2.67e-3  6.29e-3  0.29  1.82e-1  2.30e-1
 HG_U133_Plus2  227397_at  0.26  4.86e-2  8.21e-2  0.36  1.97e-2  3.05e-2
 HG_U133_Plus2  229911_at  0.69  8.84e-6  3.41e-5  0.63  1.47e-4  3.21e-4
 Stanford  15364  0.57  9.89e-2  2.46e-1  1.26  4.19e-4  7.60e-3
 Agilent_HS_21.6K  5662  -0.30  5.01e-3  2.72e-2  -0.36  7.24e-4  4.15e-3

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204083_s_at  -0.28  4.90e-1  9.26e-1  -0.28  4.29e-1  1.00e+0
 HG_U133A  212654_at  -0.67  1.22e-1  7.91e-1  -0.04  8.99e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 32312_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 32313_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 32314_g_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204083_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 212654_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204083_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 212654_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 227397_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 229911_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 15364    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 5662    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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