IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene CCIN Ensembl ENSG00000185972 Chromosome 9 Start 36159391 End 36161320
Description Calicin [Source:UniProtKB/Swiss-Prot;Acc:Q13939]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 1568
     Entrez Gene : 881
     UCSC : uc003zzb.3
     GeneCards : 1568
     RefSeq : NM_005893
     CCDS : CCDS6599.1
     Uniprot : Q13939
     Interpro : Q13939
     OMIM : 603960
     GeneTests : CCIN
     CGAP : CCIN
     PMID : 7641791

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  35106_at  -0.26  1.25e-1  1.98e-1  0.01  9.75e-1  9.84e-1
 HG_U133A  210642_at  -0.09  2.59e-1  3.09e-1  2.81  4.10e-101  2.87e-100
 HG_U133_Plus2  210642_at  -0.74  2.35e-6  9.98e-6  -0.79  1.53e-5  3.81e-5
 Stanford  277  -0.50  1.68e-1  3.48e-1  -0.30  3.72e-1  6.09e-1
 Agilent_HS_21.6K  8347  -0.05  5.48e-2  1.55e-1  -0.06  1.38e-2  4.62e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  210642_at  0.05  8.10e-1  9.83e-1  -0.18  4.99e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 35106_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 210642_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 210642_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 277    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 8347    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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