IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene CLTA Ensembl ENSG00000122705 Chromosome 9 Start 36180892 End 36202055
Description Clathrin light chain A (Lca) [Source:UniProtKB/Swiss-Prot;Acc:P09496]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 2090
     Entrez Gene : 1211
     UCSC : uc003zzc.2
     GeneCards : 2090
     RefSeq : NM_001076677
     CCDS : CCDS6600.1
     Uniprot : P09496
     Interpro : P09496
     OMIM : 118960
     GeneTests : CLTA
     CGAP : CLTA
     PMID : 7713494

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  38657_s_at  -0.12  1.27e-1  2.01e-1  0.37  1.88e-3  5.39e-3
 HG_U133A  200960_x_at  0.23  3.84e-5  8.40e-5  -3.95  1.68e-147  5.18e-146
 HG_U133A  204050_s_at  0.38  1.03e-8  3.25e-8  -1.24  3.66e-13  4.82e-13
 HG_U133A  216293_at  -0.03  8.11e-1  8.39e-1  -2.86  3.30e-75  1.19e-74
 HG_U133A  216295_s_at  0.51  5.85e-13  2.69e-12  -2.60  1.50e-107  1.25e-106
 HG_U133A  216296_at  -0.01  8.45e-1  8.69e-1  0.22  3.15e-3  3.47e-3
 HG_U133_Plus2  1560434_x_at  -0.65  1.29e-9  8.84e-9  -0.42  9.86e-6  2.53e-5
 HG_U133_Plus2  200960_x_at  -0.08  1.85e-1  2.59e-1  -0.01  9.30e-1  9.43e-1
 HG_U133_Plus2  204050_s_at  -0.21  3.57e-3  8.15e-3  0.03  7.14e-1  7.57e-1
 HG_U133_Plus2  216293_at  -0.06  7.40e-1  7.98e-1  0.41  3.29e-2  4.88e-2
 HG_U133_Plus2  216295_s_at  0.01  8.98e-1  9.25e-1  0.17  5.56e-2  7.89e-2
 HG_U133_Plus2  216296_at  -0.10  4.26e-1  5.15e-1  0.17  2.06e-1  2.58e-1
 Stanford  7608  0.76  5.58e-3  4.38e-2  0.99  2.36e-3  2.52e-2
 Agilent_HS_21.6K  3934  0.01  8.89e-1  9.38e-1  0.05  2.74e-1  4.30e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  200960_x_at  0.37  1.03e-1  7.77e-1  -0.06  7.07e-1  1.00e+0
 HG_U133A  204050_s_at  0.45  7.82e-2  7.43e-1  -0.11  5.81e-1  1.00e+0
 HG_U133A  216293_at  0.77  8.37e-2  7.54e-1  -0.02  9.48e-1  1.00e+0
 HG_U133A  216295_s_at  0.59  2.12e-2  6.83e-1  -0.18  3.29e-1  1.00e+0
 HG_U133A  216296_at  -0.39  2.19e-1  8.42e-1  0.01  9.53e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 38657_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 200960_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204050_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 216293_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 216295_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 216296_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1560434_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 200960_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204050_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 216293_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 216295_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 216296_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 7608    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 3934    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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