IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene KDM4C Ensembl ENSG00000107077 Chromosome 9 Start 6747654 End 7165647
Description JmjC domain-containing histone demethylation protein 3C (EC 1.14.11.-)(Jumonji domain-containing protein 2C)(Gene amplified in squamous cell carcinoma 1 protein)(GASC-1 protein) [Source:UniProtKB/Swiss-Prot;Acc:Q9H3R0]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 17071
     Entrez Gene : 23081
     UCSC : uc003zkh.2
     GeneCards : 17071
     RefSeq : NM_001146694
     CCDS : CCDS6471.1
     Uniprot : Q9H3R0
     Interpro : Q9H3R0
     OMIM : 605469
     GeneTests : KDM4C
     CGAP : KDM4C
     PMID : 9872452

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  209984_at  0.07  1.35e-1  1.72e-1  -0.14  1.05e-1  1.10e-1
 HG_U133A  214861_at  -0.37  2.96e-3  5.04e-3  4.94  1.13e-129  1.84e-128
 HG_U133_Plus2  1556493_a_at  -1.09  7.72e-10  5.48e-9  -1.71  3.77e-16  3.38e-15
 HG_U133_Plus2  209984_at  0.08  2.72e-1  3.58e-1  0.09  2.35e-1  2.89e-1
 HG_U133_Plus2  214861_at  -0.20  1.47e-1  2.12e-1  -0.76  7.35e-6  1.92e-5
 HG_U133_Plus2  224349_at  0.22  2.51e-1  3.34e-1  0.27  2.17e-1  2.70e-1
 HG_U133_Plus2  236732_at  -1.04  1.20e-7  6.32e-7  -1.28  3.35e-10  1.52e-9
 HG_U133_Plus2  244385_at  1.52  3.97e-11  3.32e-10  0.97  5.28e-4  1.06e-3

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  209984_at  -0.15  4.88e-1  9.26e-1  -0.02  8.97e-1  1.00e+0
 HG_U133A  214861_at  0.59  1.45e-1  8.04e-1  -0.18  5.23e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 209984_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 214861_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1556493_a_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 209984_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 214861_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 224349_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 236732_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 244385_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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