IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene PGM5 Ensembl ENSG00000154330 Chromosome 9 Start 70161635 End 70335797
Description Phosphoglucomutase-like protein 5 (Phosphoglucomutase-related protein)(PGM-RP)(Aciculin) [Source:UniProtKB/Swiss-Prot;Acc:Q15124]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 8908
     Entrez Gene : 5239
     UCSC : uc004agr.2
     GeneCards : 8908
     RefSeq : NM_021965
     CCDS : CCDS6622.2
     Uniprot : Q15124
     Interpro : Q15124
     OMIM : 600981
     GeneTests : PGM5
     CGAP : PGM5
     PMID : 8586438

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  33694_at  -0.09  5.17e-1  6.20e-1  -0.26  1.38e-1  2.15e-1
 HG_U133A  208491_s_at  -0.33  1.13e-3  2.04e-3  -1.68  2.96e-43  6.02e-43
 HG_U133_Plus2  1554560_at  0.60  9.11e-3  1.88e-2  1.01  1.86e-4  4.00e-4
 HG_U133_Plus2  208491_s_at  -1.51  1.47e-16  2.38e-15  -2.25  4.75e-30  2.22e-28
 HG_U133_Plus2  226303_at  -2.18  3.32e-28  1.87e-26  -3.17  2.33e-35  2.12e-33
 Stanford  19688  -0.34  5.12e-1  6.91e-1  0.24  4.34e-1  6.62e-1
 Agilent_HS_21.6K  2473  0.03  6.73e-1  8.04e-1  0.02  6.93e-1  7.98e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  208491_s_at  -0.27  5.18e-1  9.34e-1  -0.02  9.33e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 33694_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 208491_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1554560_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 208491_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 226303_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 19688    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 2473    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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