IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene TRPM3 Ensembl ENSG00000083067 Chromosome 9 Start 72339769 End 73251640
Description Transient receptor potential cation channel subfamily M member 3 (Long transient receptor potential channel 3)(LTrpC3)(Melastatin-2)(MLSN2) [Source:UniProtKB/Swiss-Prot;Acc:Q9HCF6]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 17992
     Entrez Gene : 80036
     UCSC : uc004aid.2
     GeneCards : 17992
     RefSeq : NM_001007470
     CCDS : CCDS6634.1
     Uniprot : Q9H0X2
     Interpro : Q9H0X2
     OMIM : 608961
     GeneTests : TRPM3
     CGAP : TRPM3
     PMID : 16382100

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  211422_at  -0.55  3.68e-7  9.93e-7  1.21  1.28e-28  2.11e-28
 HG_U133A  216452_at  -0.35  2.88e-6  7.08e-6  0.21  7.58e-2  8.02e-2
 HG_U133A  216489_at  0.15  3.40e-2  4.87e-2  3.20  6.71e-94  3.86e-93
 HG_U133A  220463_at  -0.45  1.06e-9  3.67e-9  0.40  1.29e-7  1.55e-7
 HG_U133_Plus2  1554722_at  0.14  4.41e-1  5.31e-1  0.07  7.62e-1  8.00e-1
 HG_U133_Plus2  1555252_a_at  0.18  2.41e-1  3.23e-1  0.27  1.07e-1  1.43e-1
 HG_U133_Plus2  211422_at  0.41  2.79e-2  5.06e-2  0.73  6.13e-4  1.22e-3
 HG_U133_Plus2  216452_at  -0.17  3.72e-1  4.62e-1  0.51  5.84e-3  9.92e-3
 HG_U133_Plus2  216489_at  0.62  5.69e-4  1.55e-3  0.97  1.27e-6  3.68e-6
 HG_U133_Plus2  220463_at  0.67  9.52e-5  3.03e-4  1.20  4.16e-10  1.87e-9
 HG_U133_Plus2  233022_at  -0.36  4.34e-2  7.45e-2  -0.14  4.80e-1  5.41e-1
 HG_U133_Plus2  242483_at  0.59  5.19e-3  1.14e-2  1.15  3.98e-6  1.08e-5
 Agilent_HS_21.6K  2636  -0.03  5.40e-1  7.06e-1  0.01  8.93e-1  9.36e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  211422_at  0.03  9.44e-1  9.97e-1  -0.20  3.64e-1  1.00e+0
 HG_U133A  216452_at  0.44  1.45e-1  8.04e-1  -0.11  5.53e-1  1.00e+0
 HG_U133A  216489_at  -0.11  5.49e-1  9.38e-1  -0.05  7.95e-1  1.00e+0
 HG_U133A  220463_at  -0.24  2.78e-1  8.67e-1  0.04  8.10e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 211422_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 216452_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 216489_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 220463_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1554722_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1555252_a_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 211422_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 216452_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 216489_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 220463_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 233022_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 242483_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 2636    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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