IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene AGTPBP1 Ensembl ENSG00000135049 Chromosome 9 Start 87351275 End 87546709
Description Cytosolic carboxypeptidase 1 (EC 3.4.17.-)(ATP/GTP-binding protein 1)(Nervous system nuclear protein induced by axotomy) [Source:UniProtKB/Swiss-Prot;Acc:Q9UPW5]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 17258
     Entrez Gene : 23287
     UCSC : uc010mqc.2
     GeneCards : 17258
     RefSeq : NM_015239
     CCDS : CCDS6672.1
     Uniprot : Q9UPW5
     Interpro : Q9UPW5
     OMIM : 606830
     GeneTests : AGTPBP1
     CGAP : AGTPBP1
     PMID : 11083920

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  34212_at  -1.01  2.95e-6  1.73e-5  -0.92  8.64e-4  2.73e-3
 HG_U133A  204499_at  -1.30  1.33e-21  1.18e-20  2.46  6.92e-44  1.42e-43
 HG_U133A  204500_s_at  -0.97  9.59e-37  2.22e-35  -1.30  7.76e-30  1.30e-29
 HG_U133_Plus2  204499_at  -1.82  3.57e-24  1.30e-22  -2.21  1.67e-29  7.18e-28
 HG_U133_Plus2  204500_s_at  -1.23  9.00e-42  2.25e-39  -1.35  1.73e-26  5.11e-25
 HG_U133_Plus2  237141_x_at  -0.38  2.36e-2  4.36e-2  -0.34  7.12e-2  9.88e-2
 Agilent_HS_21.6K  1066  -0.13  2.46e-1  4.29e-1  -0.13  2.43e-1  3.94e-1
 Agilent_HS_21.6K  8227  -0.15  2.49e-3  1.59e-2  -0.14  2.93e-2  8.27e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204499_at  0.28  4.08e-1  9.03e-1  0.10  7.07e-1  1.00e+0
 HG_U133A  204500_s_at  0.46  5.30e-2  7.09e-1  0.13  5.32e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 34212_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204499_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204500_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204499_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204500_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 237141_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 1066    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 8227    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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