IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene ZCCHC6 Ensembl ENSG00000083223 Chromosome 9 Start 88092468 End 88159189
Description Zinc finger CCHC domain-containing protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q5VYS8]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 25817
     Entrez Gene : 79670
     UCSC : uc004aoq.2
     GeneCards : 25817
     RefSeq : NM_024617
     CCDS : CCDS35057.1
     Uniprot : Q5VYS8
     Interpro : Q5VYS8
     GeneTests : ZCCHC6
     CGAP : ZCCHC6
     PMID : 11214970

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  220933_s_at  -0.28  1.49e-5  3.39e-5  -4.94  8.32e-58  2.16e-57
 HG_U133_Plus2  220933_s_at  -0.28  2.33e-5  8.35e-5  -0.34  3.14e-4  6.53e-4
 HG_U133_Plus2  236155_at  0.00  9.53e-1  9.67e-1  0.06  4.33e-1  4.95e-1
 HG_U133_Plus2  236243_at  -0.45  3.48e-8  1.97e-7  -0.17  6.74e-2  9.40e-2
 HG_U133_Plus2  238800_s_at  -0.30  2.13e-3  5.14e-3  0.11  2.54e-1  3.10e-1
 HG_U133_Plus2  242776_at  -0.34  8.26e-2  1.30e-1  -0.53  9.56e-3  1.57e-2
 Agilent_HS_21.6K  6679  -0.01  7.68e-1  8.67e-1  0.02  6.10e-1  7.38e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  220933_s_at  -0.01  9.78e-1  9.99e-1  0.14  5.07e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 220933_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 220933_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 236155_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 236243_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.