IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene OMD Ensembl ENSG00000127083 Chromosome 9 Start 94216359 End 94226381
Description Osteomodulin Precursor (Osteoadherin)(OSAD)(Keratan sulfate proteoglycan osteomodulin)(KSPG osteomodulin) [Source:UniProtKB/Swiss-Prot;Acc:Q99983]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :
     HGNC : 8134
     Entrez Gene : 4958
     UCSC : uc004asd.3
     GeneCards : 8134
     RefSeq : NM_005014
     CCDS : CCDS6696.1
     Uniprot : Q99983
     Interpro : Q99983
     GeneTests : OMD
     CGAP : OMD

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  41031_at  -0.21  2.87e-1  3.90e-1  -0.16  5.56e-1  6.53e-1
 HG_U133A  205907_s_at  -0.73  2.75e-9  9.16e-9  1.73  4.31e-63  1.23e-62
 HG_U133A  205908_s_at  -0.91  1.20e-7  3.40e-7  -1.56  1.05e-17  1.48e-17
 HG_U133_Plus2  205907_s_at  -0.99  2.96e-7  1.46e-6  -1.02  1.26e-6  3.64e-6
 HG_U133_Plus2  205908_s_at  -1.09  1.86e-7  9.48e-7  -0.97  1.03e-5  2.64e-5
 Stanford  20684  -1.58  5.15e-4  9.44e-3  -0.72  1.09e-1  2.88e-1
 Agilent_HS_21.6K  12004  -0.48  1.65e-4  1.80e-3  -0.51  2.14e-4  1.51e-3

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  205907_s_at  -0.11  6.66e-1  9.63e-1  -0.31  3.75e-1  1.00e+0
 HG_U133A  205908_s_at  -0.89  1.39e-1  8.02e-1  -0.27  5.20e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 41031_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 205907_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 205908_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 205907_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 205908_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 20684    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 12004    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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Cancer Gene Index        (help)

If 0 entry was found, please remove the search key "lung cancer".
Keyword DiseaseData Statement PubMed Organism
omd aneurysmal bone cyst Aneurysmal bone cyst variant translocations upregulate USP6 transcription by promoter swapping with the ZNF9, COL1A1, TRAP150, and OMD genes. 15735689 Human

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