IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene ECM2 Ensembl ENSG00000106823 Chromosome 9 Start 94295657 End 94338158
Description Extracellular matrix protein 2 Precursor (Matrix glycoprotein SC1/ECM2) [Source:UniProtKB/Swiss-Prot;Acc:O94769]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 3154
     Entrez Gene : 1842
     UCSC : uc004ash.2
     GeneCards : 3154
     RefSeq : NM_001393
     CCDS : CCDS6698.1
     Uniprot : O94769
     Interpro : O94769
     OMIM : 603479
     GeneTests : ECM2
     CGAP : ECM2
     PMID : 9790758

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  39673_i_at  -1.37  6.31e-18  3.04e-16  -1.70  1.59e-13  3.73e-12
 HG_U95  39674_r_at  -0.83  7.40e-9  7.73e-8  -0.88  2.38e-5  1.09e-4
 HG_U133A  206101_at  -1.18  1.21e-45  4.78e-44  -2.65  3.85e-61  1.06e-60
 HG_U133_Plus2  1568779_a_at  -0.72  1.47e-5  5.43e-5  -1.32  2.13e-12  1.25e-11
 HG_U133_Plus2  206101_at  -1.39  2.30e-24  8.53e-23  -1.74  6.68e-22  1.15e-20
 Stanford  18347  -1.08  3.34e-2  1.39e-1  -1.09  2.69e-2  1.16e-1
 Agilent_HS_21.6K  8959  0.20  1.14e-1  2.58e-1  0.22  1.31e-1  2.53e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  206101_at  0.08  7.36e-1  9.74e-1  -0.10  6.99e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 39673_i_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 39674_r_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 206101_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1568779_a_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 206101_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 18347    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 8959    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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