IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene PHF2 Ensembl ENSG00000197724 Chromosome 9 Start 95378730 End 95481690
Description PHD finger protein 2 (GRC5) [Source:UniProtKB/Swiss-Prot;Acc:O75151]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 8920
     Entrez Gene : 5253
     UCSC : uc004aub.2
     GeneCards : 8920
     RefSeq : NM_005392
     CCDS : CCDS35069.1
     Uniprot : O75151
     Interpro : O75151
     OMIM : 604351
     GeneTests : PHF2
     CGAP : PHF2
     PMID : 10051327

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  39117_at  -0.74  9.77e-13  2.11e-11  -0.52  1.78e-4  6.69e-4
 HG_U133A  207138_at  -0.54  8.18e-5  1.72e-4  -2.35  9.95e-45  2.08e-44
 HG_U133A  212726_at  -0.72  1.13e-35  2.47e-34  3.58  5.50e-96  3.34e-95
 HG_U133_Plus2  207138_at  0.40  3.52e-2  6.20e-2  0.47  3.81e-2  5.58e-2
 HG_U133_Plus2  212726_at  -0.32  4.01e-5  1.37e-4  0.18  4.74e-2  6.81e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  207138_at  0.42  3.15e-1  8.80e-1  -0.28  1.98e-1  1.00e+0
 HG_U133A  212726_at  -0.08  7.00e-1  9.68e-1  0.07  6.89e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 39117_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 207138_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 212726_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 207138_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 212726_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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