IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene NCBP1 Ensembl ENSG00000136937 Chromosome 9 Start 99435526 End 99475851
Description Nuclear cap-binding protein subunit 1 (80 kDa nuclear cap-binding protein)(NCBP 80 kDa subunit)(CBP80) [Source:UniProtKB/Swiss-Prot;Acc:Q09161]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 7658
     Entrez Gene : 4686
     UCSC : uc004axq.2
     GeneCards : 7658
     RefSeq : NM_002486
     CCDS : CCDS6728.1
     Uniprot : Q09161
     Interpro : Q09161
     OMIM : 600469
     GeneTests : NCBP1
     CGAP : NCBP1
     PMID : 7937105

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  37987_at  0.12  4.18e-1  5.25e-1  0.58  6.01e-4  1.97e-3
 HG_U133A  209519_at  0.09  5.01e-1  5.54e-1  4.17  3.88e-60  1.05e-59
 HG_U133A  209520_s_at  0.72  2.45e-19  1.84e-18  2.90  2.79e-101  1.96e-100
 HG_U133_Plus2  209519_at  0.20  2.59e-1  3.43e-1  -0.02  9.23e-1  9.38e-1
 HG_U133_Plus2  209520_s_at  0.31  3.46e-3  7.94e-3  0.54  1.65e-5  4.11e-5
 Stanford  6100  0.05  9.00e-1  9.47e-1  0.49  1.04e-1  2.81e-1
 Stanford  12038  1.16  9.06e-2  2.32e-1  0.90  7.51e-2  2.25e-1
 Agilent_HS_21.6K  12372  0.15  3.64e-2  1.16e-1  0.29  2.03e-5  2.07e-4

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  209519_at  -0.20  6.81e-1  9.66e-1  0.27  5.06e-1  1.00e+0
 HG_U133A  209520_s_at  -0.11  7.08e-1  9.69e-1  0.23  2.91e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 37987_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 209519_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 209520_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 209519_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 209520_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 6100    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 12038    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 12372    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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